HL_4V6A_033
3D structure
- PDB id
- 4V6A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of EF-P bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6A_033 not in the Motif Atlas
- Homologous match to HL_4V9Q_214
- Geometric discrepancy: 0.1111
- The information below is about HL_4V9Q_214
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
4V6A|1|AW|G|31
4V6A|1|AW|C|32
4V6A|1|AW|U|33
4V6A|1|AW|C|34
4V6A|1|AW|A|35
4V6A|1|AW|U|36
4V6A|1|AW|A|37
4V6A|1|AW|A|38
4V6A|1|AW|C|39
Current chains
- Chain AW
- tRNA-Met
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AV
- Elongation factor P
- Chain AX
- RNA (5'-R(P*AP*AP*AP*UP*G)-3')
Coloring options: