HL_4V6G_131
3D structure
- PDB id
- 4V6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of 70S ribosome with two tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 4V6G|1|CA|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6G_131 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1293
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V6G|1|CA|G|963
4V6G|1|CA|A|964
4V6G|1|CA|A|965
4V6G|1|CA|G|966
4V6G|1|CA|C|967
4V6G|1|CA|A|968
4V6G|1|CA|A|969
4V6G|1|CA|C|970
4V6G|1|CA|G|971
4V6G|1|CA|C|972
Current chains
- Chain CA
- 16S RRNA (E.COLI NUMBERING)
Nearby chains
- Chain CB
- Transfer RNA; tRNA
- Chain CC
- Transfer RNA; tRNA
- Chain CL
- 30S RIBOSOMAL PROTEIN S9
- Chain CM
- 30S RIBOSOMAL PROTEIN S10
- Chain CP
- 30S RIBOSOMAL PROTEIN S13
Coloring options: