HL_4V6K_073

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

4V6K|1|BA|U|84, 4V6K|1|BA|G|86

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6K_073 not in the Motif Atlas

Geometric match to HL_7RQB_009

Geometric discrepancy: 0.2155

The information below is about HL_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89098.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

4V6K|1|BA|G|82
4V6K|1|BA|C|83
4V6K|1|BA|U|84
4V6K|1|BA|U|85
4V6K|1|BA|G|86
4V6K|1|BA|C|87

Current chains

Chain BA

16S ribosomal RNA

Nearby chains