HL_4V6K_083

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6K_083 not in the Motif Atlas

Geometric match to HL_4V9F_019

Geometric discrepancy: 0.3529

The information below is about HL_4V9F_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41169.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

4

Unit IDs

4V6K|1|BA|G|462
4V6K|1|BA|U|463
4V6K|1|BA|U|464
4V6K|1|BA|A|465
4V6K|1|BA|A|466
4V6K|1|BA|U|467
4V6K|1|BA|A|468
4V6K|1|BA|C|469
4V6K|1|BA|C|470

Current chains

Chain BA

16S ribosomal RNA

Nearby chains