HL_4V6K_100
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- 4V6K|1|BA|C|1322
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6K_100 not in the Motif Atlas
- Homologous match to HL_5J7L_028
- Geometric discrepancy: 0.343
- The information below is about HL_5J7L_028
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_02887.3
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V6K|1|BA|C|1314
4V6K|1|BA|U|1315
4V6K|1|BA|G|1316
4V6K|1|BA|C|1317
4V6K|1|BA|A|1318
4V6K|1|BA|A|1319
4V6K|1|BA|C|1320
4V6K|1|BA|U|1321
4V6K|1|BA|C|1322
4V6K|1|BA|G|1323
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain Ab
- 50S ribosomal protein L31
- Chain BQ
- 30S ribosomal protein S13
- Chain BR
- 30S ribosomal protein S14
- Chain BW
- 30S ribosomal protein S19
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