HL_4V6L_102

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6L_102 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.296

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4V6L|1|BB|C|2551
4V6L|1|BB|OMU|2552
4V6L|1|BB|G|2553
4V6L|1|BB|U|2554
4V6L|1|BB|U|2555
4V6L|1|BB|C|2556
4V6L|1|BB|G|2557

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains