HL_4V6M_096
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- UGAAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4V6M|1|B8|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6M_096 not in the Motif Atlas
- Homologous match to HL_7A0S_058
- Geometric discrepancy: 0.22
- The information below is about HL_7A0S_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53454.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V6M|1|B8|U|2404
4V6M|1|B8|G|2405
4V6M|1|B8|A|2406
4V6M|1|B8|A|2407
4V6M|1|B8|U|2408
4V6M|1|B8|G|2409
4V6M|1|B8|G|2410
4V6M|1|B8|A|2411
4V6M|1|B8|A|2412
4V6M|1|B8|G|2413
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BL
- 50S ribosomal protein L15
Coloring options: