HL_4V6Q_053
3D structure
- PDB id
- 4V6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 11.5 Å
Loop
- Sequence
- GGGACCAUCC
- Length
- 10 nucleotides
- Bulged bases
- 4V6Q|1|BB|G|411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6Q_053 not in the Motif Atlas
- Geometric match to HL_4V83_139
- Geometric discrepancy: 0.2532
- The information below is about HL_4V83_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
4V6Q|1|BB|G|409
4V6Q|1|BB|G|410
4V6Q|1|BB|G|411
4V6Q|1|BB|A|412
4V6Q|1|BB|C|413
4V6Q|1|BB|C|414
4V6Q|1|BB|A|415
4V6Q|1|BB|U|416
4V6Q|1|BB|C|417
4V6Q|1|BB|C|418
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
No other chains within 10ÅColoring options: