HL_4V6V_047
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4V6V|1|BA|G|329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6V_047 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.2098
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
4V6V|1|BA|G|327
4V6V|1|BA|U|328
4V6V|1|BA|G|329
4V6V|1|BA|A|330
4V6V|1|BA|C|331
4V6V|1|BA|A|332
4V6V|1|BA|G|333
4V6V|1|BA|C|334
4V6V|1|BA|C|335
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BF
- 50S ribosomal protein L4
- Chain BY
- 50S ribosomal protein L24
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