HL_4V6Y_002
3D structure
- PDB id
- 4V6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- CCU(CM0)AC(6MZ)AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: CM0, 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6Y_002 not in the Motif Atlas
- Homologous match to HL_7U2I_104
- Geometric discrepancy: 0.2766
- The information below is about HL_7U2I_104
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V6Y|1|A1|C|31
4V6Y|1|A1|C|32
4V6Y|1|A1|U|33
4V6Y|1|A1|CM0|34
4V6Y|1|A1|A|35
4V6Y|1|A1|C|36
4V6Y|1|A1|6MZ|37
4V6Y|1|A1|A|38
4V6Y|1|A1|G|39
Current chains
- Chain A1
- fMet-Val-tRNA-Val
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AL
- 30S ribosomal protein S12
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