HL_4V6Y_044

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V6Y|1|BA|A|196, 4V6Y|1|BA|A|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Y_044 not in the Motif Atlas

Geometric match to HL_7A0S_006

Geometric discrepancy: 0.2661

The information below is about HL_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4V6Y|1|BA|G|194
4V6Y|1|BA|A|195
4V6Y|1|BA|A|196
4V6Y|1|BA|A|197
4V6Y|1|BA|C|198
4V6Y|1|BA|A|199
4V6Y|1|BA|U|200
4V6Y|1|BA|C|201

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L13

Chain BX

50S ribosomal protein L25