HL_4V6Y_054

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

4V6Y|1|BA|G|548, 4V6Y|1|BA|G|549

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Y_054 not in the Motif Atlas

Homologous match to HL_5J7L_149

Geometric discrepancy: 0.3057

The information below is about HL_5J7L_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

4V6Y|1|BA|G|543
4V6Y|1|BA|C|544
4V6Y|1|BA|U|545
4V6Y|1|BA|U|546
4V6Y|1|BA|A|547
4V6Y|1|BA|G|548
4V6Y|1|BA|G|549
4V6Y|1|BA|C|550

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BJ

50S ribosomal protein L9

Chain BR

50S ribosomal protein L19