HL_4V6Z_005
3D structure
- PDB id
- 4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- G(OMC)UCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- 4V6Z|1|A3|U|34
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6Z_005 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.1617
- The information below is about HL_5E81_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36427.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 37
Unit IDs
4V6Z|1|A3|G|32
4V6Z|1|A3|OMC|33
4V6Z|1|A3|U|34
4V6Z|1|A3|C|35
4V6Z|1|A3|A|36
4V6Z|1|A3|U|37
4V6Z|1|A3|A|38
4V6Z|1|A3|A|39
4V6Z|1|A3|C|40
Current chains
- Chain A3
- tRNA-fMet
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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