3D structure

PDB id
4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
GCUUAGGC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V6Z_054 not in the Motif Atlas
Homologous match to HL_7RQB_017
Geometric discrepancy: 0.4014
The information below is about HL_7RQB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6Z|1|BA|G|543
4V6Z|1|BA|C|544
4V6Z|1|BA|U|545
4V6Z|1|BA|U|546
4V6Z|1|BA|A|547
4V6Z|1|BA|G|548
4V6Z|1|BA|G|549
4V6Z|1|BA|C|550

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BJ
50S ribosomal protein L13
Chain BR
50S ribosomal protein L21

Coloring options:


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