HL_4V6Z_070

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Z_070 not in the Motif Atlas

Homologous match to HL_7A0S_032

Geometric discrepancy: 0.2578

The information below is about HL_7A0S_032

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23932.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

40

Unit IDs

4V6Z|1|BA|G|1281
4V6Z|1|BA|U|1282
4V6Z|1|BA|G|1283
4V6Z|1|BA|A|1284
4V6Z|1|BA|A|1285
4V6Z|1|BA|A|1286
4V6Z|1|BA|A|1287
4V6Z|1|BA|G|1288
4V6Z|1|BA|C|1289

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BS

50S ribosomal protein L22