3D structure

PDB id
4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CGCCAG
Length
6 nucleotides
Bulged bases
4V6Z|1|BA|C|2145
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V6Z_089 not in the Motif Atlas
Homologous match to HL_5J7L_184
Geometric discrepancy: 0.5257
The information below is about HL_5J7L_184
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_79299.1
Basepair signature
cWW-tSW-R
Number of instances in this motif group
44

Unit IDs

4V6Z|1|BA|C|2143
4V6Z|1|BA|G|2144
4V6Z|1|BA|C|2145
4V6Z|1|BA|C|2146
4V6Z|1|BA|A|2147
4V6Z|1|BA|G|2148

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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