HL_4V70_064

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

4V70|1|BA|U|958, 4V70|1|BA|C|961

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V70_064 not in the Motif Atlas

Homologous match to HL_7RQB_027

Geometric discrepancy: 0.3227

The information below is about HL_7RQB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4V70|1|BA|U|955
4V70|1|BA|G|956
4V70|1|BA|C|957
4V70|1|BA|U|958
4V70|1|BA|A|959
4V70|1|BA|A|960
4V70|1|BA|C|961
4V70|1|BA|G|962

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16