HL_4V72_042

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V72|1|BA|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_042 not in the Motif Atlas

Geometric match to HL_7MLW_002

Geometric discrepancy: 0.362

The information below is about HL_7MLW_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V72|1|BA|U|137
4V72|1|BA|U|138
4V72|1|BA|U|139
4V72|1|BA|C|140
4V72|1|BA|G|141
4V72|1|BA|A|142

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23