HL_4V72_060

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

4V72|1|BA|U|747, 4V72|1|BA|A|751, 4V72|1|BA|A|752

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_060 not in the Motif Atlas

Homologous match to HL_4WF9_023

Geometric discrepancy: 0.3985

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

4V72|1|BA|U|744
4V72|1|BA|G|745
4V72|1|BA|U|746
4V72|1|BA|U|747
4V72|1|BA|G|748
4V72|1|BA|A|749
4V72|1|BA|A|750
4V72|1|BA|A|751
4V72|1|BA|A|752
4V72|1|BA|A|753

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BD

50S ribosomal protein L3

Chain BS

50S ribosomal protein L22