HL_4V72_062

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases (A, C, G, U)

827U, 830G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_062 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.2522

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.1

Basepair signature

cWW-F-F

Number of instances in this motif group

5

Unit IDs

4V72|1|BA|U|826
4V72|1|BA|U|827
4V72|1|BA|U|828
4V72|1|BA|A|829
4V72|1|BA|G|830
4V72|1|BA|G|831

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15