HL_4V74_035

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUGCAACUCG

Length

10 nucleotides

Bulged bases

4V74|1|AA|C|1322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V74_035 not in the Motif Atlas

Geometric match to HL_4FRN_005

Geometric discrepancy: 0.335

The information below is about HL_4FRN_005

Detailed Annotation

T-loop with 2 bulged bases not stacked

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

4V74|1|AA|C|1314
4V74|1|AA|U|1315
4V74|1|AA|G|1316
4V74|1|AA|C|1317
4V74|1|AA|A|1318
4V74|1|AA|A|1319
4V74|1|AA|C|1320
4V74|1|AA|U|1321
4V74|1|AA|C|1322
4V74|1|AA|G|1323

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal protein S13

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19