HL_4V74_064

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

4V74|1|BA|U|958, 4V74|1|BA|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V74_064 not in the Motif Atlas

Geometric match to HL_5TBW_042

Geometric discrepancy: 0.3204

The information below is about HL_5TBW_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4V74|1|BA|U|955
4V74|1|BA|G|956
4V74|1|BA|C|957
4V74|1|BA|U|958
4V74|1|BA|A|959
4V74|1|BA|A|960
4V74|1|BA|C|961
4V74|1|BA|G|962

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16