3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
GGUAACGGC
Length
9 nucleotides
Bulged bases
4V75|1|AA|G|266
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V75_012 not in the Motif Atlas
Homologous match to HL_4LFB_006
Geometric discrepancy: 0.226
The information below is about HL_4LFB_006
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_84299.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

4V75|1|AA|G|259
4V75|1|AA|G|260
4V75|1|AA|U|261
4V75|1|AA|A|262
4V75|1|AA|A|263
4V75|1|AA|C|264
4V75|1|AA|G|265
4V75|1|AA|G|266
4V75|1|AA|C|267

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AQ
30S ribosomal protein S17
Chain AT
30S ribosomal protein S20

Coloring options:


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