HL_4V76_092

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

4V76|1|BA|A|2268, 4V76|1|BA|C|2275

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V76_092 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.2888

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

4V76|1|BA|C|2264
4V76|1|BA|U|2265
4V76|1|BA|A|2266
4V76|1|BA|A|2267
4V76|1|BA|A|2268
4V76|1|BA|G|2269
4V76|1|BA|A|2270
4V76|1|BA|G|2271
4V76|1|BA|U|2272
4V76|1|BA|A|2273
4V76|1|BA|A|2274
4V76|1|BA|C|2275
4V76|1|BA|G|2276

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16

Chain BW

50S ribosomal protein L27