HL_4V76_099

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUGAAGUAGG

Length

10 nucleotides

Bulged bases

4V76|1|BA|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V76_099 not in the Motif Atlas

Geometric match to HL_2DER_005

Geometric discrepancy: 0.3261

The information below is about HL_2DER_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V76|1|BA|C|2527
4V76|1|BA|U|2528
4V76|1|BA|G|2529
4V76|1|BA|A|2530
4V76|1|BA|A|2531
4V76|1|BA|G|2532
4V76|1|BA|U|2533
4V76|1|BA|A|2534
4V76|1|BA|G|2535
4V76|1|BA|G|2536

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6