3D structure

PDB id
4V77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
CCUUGAG
Length
7 nucleotides
Bulged bases
4V77|1|AA|C|841, 4V77|1|AA|U|843, 4V77|1|AA|A|845
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V77_024 not in the Motif Atlas
Geometric match to HL_2Y8W_001
Geometric discrepancy: 0.152
The information below is about HL_2Y8W_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81100.2
Basepair signature
cWW
Number of instances in this motif group
3

Unit IDs

4V77|1|AA|C|840
4V77|1|AA|C|841
4V77|1|AA|U|842
4V77|1|AA|U|843
4V77|1|AA|G|844
4V77|1|AA|A|845
4V77|1|AA|G|846

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21

Coloring options:


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