HL_4V77_039

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGCUAAUCUG

Length

10 nucleotides

Bulged bases

4V77|1|BA|G|60

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V77_039 not in the Motif Atlas

Geometric match to HL_6JXM_002

Geometric discrepancy: 0.2934

The information below is about HL_6JXM_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_97725.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V77|1|BA|U|59
4V77|1|BA|G|60
4V77|1|BA|C|61
4V77|1|BA|U|62
4V77|1|BA|A|63
4V77|1|BA|A|64
4V77|1|BA|U|65
4V77|1|BA|C|66
4V77|1|BA|U|67
4V77|1|BA|G|68

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23

Chain BY

50S ribosomal protein L29