HL_4V78_008

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

4V78|1|AA|U|84

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V78_008 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3212

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4V78|1|AA|G|82
4V78|1|AA|C|83
4V78|1|AA|U|84
4V78|1|AA|U|85
4V78|1|AA|G|86
4V78|1|AA|C|87

Current chains

Chain AA

16S ribosomal RNA

Nearby chains