HL_4V78_044

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V78|1|BA|A|196, 4V78|1|BA|A|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V78_044 not in the Motif Atlas

Homologous match to HL_7A0S_006

Geometric discrepancy: 0.149

The information below is about HL_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4V78|1|BA|G|194
4V78|1|BA|A|195
4V78|1|BA|A|196
4V78|1|BA|A|197
4V78|1|BA|C|198
4V78|1|BA|A|199
4V78|1|BA|U|200
4V78|1|BA|C|201

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28