HL_4V78_050

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

4V78|1|BA|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V78_050 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.5573

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V78|1|BA|G|381
4V78|1|BA|A|382
4V78|1|BA|C|383
4V78|1|BA|A|384
4V78|1|BA|C|385
4V78|1|BA|G|386
4V78|1|BA|U|387
4V78|1|BA|G|388
4V78|1|BA|G|389
4V78|1|BA|U|390
4V78|1|BA|A|391
4V78|1|BA|U|392
4V78|1|BA|C|393

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28