HL_4V78_066

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4V78|1|BA|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V78_066 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1035

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4V78|1|BA|C|1064
4V78|1|BA|U|1065
4V78|1|BA|U|1066
4V78|1|BA|A|1067
4V78|1|BA|G|1068
4V78|1|BA|A|1069
4V78|1|BA|A|1070
4V78|1|BA|G|1071
4V78|1|BA|C|1072
4V78|1|BA|A|1073
4V78|1|BA|G|1074

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BI

50S ribosomal protein L11

Chain BM

50S ribosomal protein L16