HL_4V79_009

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_009 not in the Motif Atlas

Homologous match to HL_5J7L_003

Geometric discrepancy: 0.3288

The information below is about HL_5J7L_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V79|1|AA|G|158
4V79|1|AA|G|159
4V79|1|AA|A|160
4V79|1|AA|A|161
4V79|1|AA|A|162
4V79|1|AA|C|163

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20

Chain BK

50S ribosomal protein L14

Chain BP

50S ribosomal protein L19