HL_4V79_031

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

4V79|1|AA|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_031 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.2556

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4V79|1|AA|G|1089
4V79|1|AA|U|1090
4V79|1|AA|U|1091
4V79|1|AA|A|1092
4V79|1|AA|A|1093
4V79|1|AA|G|1094
4V79|1|AA|U|1095
4V79|1|AA|C|1096

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5

Chain AU

30S ribosomal protein S21