HL_4V79_067

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_067 not in the Motif Atlas

Homologous match to HL_7A0S_029

Geometric discrepancy: 0.5337

The information below is about HL_7A0S_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4V79|1|BA|C|1092
4V79|1|BA|G|1093
4V79|1|BA|U|1094
4V79|1|BA|A|1095
4V79|1|BA|A|1096
4V79|1|BA|U|1097
4V79|1|BA|A|1098
4V79|1|BA|G|1099

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BI

50S ribosomal protein L11