3D structure

PDB id
4V79 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
UGAAGUAG
Length
8 nucleotides
Bulged bases
4V79|1|BA|G|2529
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V79_099 not in the Motif Atlas
Homologous match to HL_4WF9_057
Geometric discrepancy: 0.1846
The information below is about HL_4WF9_057
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_31585.4
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
20

Unit IDs

4V79|1|BA|U|2528
4V79|1|BA|G|2529
4V79|1|BA|A|2530
4V79|1|BA|A|2531
4V79|1|BA|G|2532
4V79|1|BA|U|2533
4V79|1|BA|A|2534
4V79|1|BA|G|2535

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B4
50S ribosomal protein L36
Chain BG
50S ribosomal protein L6

Coloring options:


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