HL_4V79_104

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

4V79|1|BA|G|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_104 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1628

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

4V79|1|BA|C|2745
4V79|1|BA|U|2746
4V79|1|BA|G|2747
4V79|1|BA|A|2748
4V79|1|BA|A|2749
4V79|1|BA|A|2750
4V79|1|BA|G|2751
4V79|1|BA|C|2752
4V79|1|BA|A|2753
4V79|1|BA|U|2754
4V79|1|BA|C|2755
4V79|1|BA|U|2756
4V79|1|BA|A|2757
4V79|1|BA|A|2758
4V79|1|BA|G|2759

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L13