HL_4V79_107

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

AGCGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_107 not in the Motif Atlas

Homologous match to HL_5J7L_202

Geometric discrepancy: 0.4635

The information below is about HL_5J7L_202

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V79|1|BA|A|2856
4V79|1|BA|G|2857
4V79|1|BA|C|2858
4V79|1|BA|G|2859
4V79|1|BA|A|2860
4V79|1|BA|U|2861

Current chains

Chain BA

23S ribosomal RNA

Nearby chains