HL_4V7A_067

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7A_067 not in the Motif Atlas

Homologous match to HL_5J7L_165

Geometric discrepancy: 0.2601

The information below is about HL_5J7L_165

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_28252.9

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

141

Unit IDs

4V7A|1|BA|G|1281
4V7A|1|BA|U|1282
4V7A|1|BA|G|1283
4V7A|1|BA|A|1284
4V7A|1|BA|A|1285
4V7A|1|BA|A|1286
4V7A|1|BA|A|1287
4V7A|1|BA|G|1288
4V7A|1|BA|C|1289

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BN

50S ribosomal protein L17

Chain BS

50S ribosomal protein L22