HL_4V7A_071

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GCGACGGUUGUC

Length

12 nucleotides

Bulged bases

4V7A|1|BA|U|1460

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7A_071 not in the Motif Atlas

Geometric match to HL_4V88_197

Geometric discrepancy: 0.3485

The information below is about HL_4V88_197

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4V7A|1|BA|G|1450
4V7A|1|BA|C|1451
4V7A|1|BA|G|1452
4V7A|1|BA|A|1453
4V7A|1|BA|C|1454
4V7A|1|BA|G|1455
4V7A|1|BA|G|1456
4V7A|1|BA|U|1457
4V7A|1|BA|U|1458
4V7A|1|BA|G|1459
4V7A|1|BA|U|1460
4V7A|1|BA|C|1461

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17