3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GUGCAAUGGC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V7A_091 not in the Motif Atlas
Geometric match to HL_6VMY_005
Geometric discrepancy: 0.3487
The information below is about HL_6VMY_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_55436.1
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4V7A|1|BA|G|2323
4V7A|1|BA|U|2324
4V7A|1|BA|G|2325
4V7A|1|BA|C|2326
4V7A|1|BA|A|2327
4V7A|1|BA|A|2328
4V7A|1|BA|U|2329
4V7A|1|BA|G|2330
4V7A|1|BA|G|2331
4V7A|1|BA|C|2332

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA
Chain BF
50S ribosomal protein L5
Chain BM
50S ribosomal protein L16
Chain BW
50S ribosomal protein L27

Coloring options:


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