HL_4V7B_061

3D structure

PDB id

4V7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V7B|1|BA|A|781, 4V7B|1|BA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7B_061 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1688

The information below is about HL_7A0S_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V7B|1|BA|U|779
4V7B|1|BA|G|780
4V7B|1|BA|A|781
4V7B|1|BA|A|782
4V7B|1|BA|A|783
4V7B|1|BA|G|784
4V7B|1|BA|G|785

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2