HL_4V7C_008

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

4V7C|1|AA|C|328

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7C_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.2311

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V7C|1|AA|A|320
4V7C|1|AA|A|321
4V7C|1|AA|C|322
4V7C|1|AA|U|323
4V7C|1|AA|G|324
4V7C|1|AA|A|325
4V7C|1|AA|G|326
4V7C|1|AA|A|327
4V7C|1|AA|C|328
4V7C|1|AA|A|329
4V7C|1|AA|C|330
4V7C|1|AA|G|331
4V7C|1|AA|G|332
4V7C|1|AA|U|333

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20