HL_4V7D_026

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

4V7D|1|AA|U|958, 4V7D|1|AA|C|961

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_026 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1313

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V7D|1|AA|U|955
4V7D|1|AA|G|956
4V7D|1|AA|C|957
4V7D|1|AA|U|958
4V7D|1|AA|A|959
4V7D|1|AA|A|960
4V7D|1|AA|C|961
4V7D|1|AA|G|962

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AP

50S ribosomal protein L16