HL_4V7D_061

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

4V7D|1|AA|G|2529

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_061 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.1252

The information below is about HL_5J7L_194

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

4V7D|1|AA|U|2528
4V7D|1|AA|G|2529
4V7D|1|AA|A|2530
4V7D|1|AA|A|2531
4V7D|1|AA|G|2532
4V7D|1|AA|U|2533
4V7D|1|AA|A|2534
4V7D|1|AA|G|2535

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A8

50S ribosomal protein L36

Chain AH

50S ribosomal protein L6

Chain BZ

Elongation Factor G