3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
4V7D|1|AA|G|2751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V7D_066 not in the Motif Atlas
Homologous match to HL_5J7L_199
Geometric discrepancy: 0.1223
The information below is about HL_5J7L_199
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_74055.2
Basepair signature
cWW-tWH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
7

Unit IDs

4V7D|1|AA|C|2745
4V7D|1|AA|U|2746
4V7D|1|AA|G|2747
4V7D|1|AA|A|2748
4V7D|1|AA|A|2749
4V7D|1|AA|A|2750
4V7D|1|AA|G|2751
4V7D|1|AA|C|2752
4V7D|1|AA|A|2753
4V7D|1|AA|U|2754
4V7D|1|AA|C|2755
4V7D|1|AA|U|2756
4V7D|1|AA|A|2757
4V7D|1|AA|A|2758
4V7D|1|AA|G|2759

Current chains

Chain AA
23S ribosomal RNA

Nearby chains

Chain A8
50S ribosomal protein L36
Chain AH
50S ribosomal protein L6
Chain AM
50S ribosomal protein L13

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