HL_4V7D_118

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UGGUCGGACAUCA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_118 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3421

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

4V7D|1|AA|U|2302
4V7D|1|AA|G|2303
4V7D|1|AA|G|2304
4V7D|1|AA|U|2305
4V7D|1|AA|C|2306
4V7D|1|AA|G|2307
4V7D|1|AA|G|2308
4V7D|1|AA|A|2309
4V7D|1|AA|C|2310
4V7D|1|AA|A|2311
4V7D|1|AA|U|2312
4V7D|1|AA|C|2313
4V7D|1|AA|A|2314

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AG

50S ribosomal protein L5

Chain BV

Transfer RNA; tRNA