HL_4V7D_128

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4V7D|1|BA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_128 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.326

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

4V7D|1|BA|C|341
4V7D|1|BA|C|342
4V7D|1|BA|U|343
4V7D|1|BA|A|344
4V7D|1|BA|C|345
4V7D|1|BA|G|346
4V7D|1|BA|G|347
4V7D|1|BA|G|348

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain AN

50S ribosomal protein L14

Chain AS

50S ribosomal protein L19

Chain BZ

Elongation Factor G