HL_4V7I_018
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- GCUUAGGC
- Length
- 8 nucleotides
- Bulged bases
- 4V7I|1|A8|U|546
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7I_018 not in the Motif Atlas
- Geometric match to HL_5TBW_022
- Geometric discrepancy: 0.2466
- The information below is about HL_5TBW_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4V7I|1|A8|G|543
4V7I|1|A8|C|544
4V7I|1|A8|U|545
4V7I|1|A8|U|546
4V7I|1|A8|A|547
4V7I|1|A8|G|548
4V7I|1|A8|G|549
4V7I|1|A8|C|550
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
- Chain AR
- 50S ribosomal protein L21
Coloring options: