HL_4V7I_051
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 4V7I|1|A8|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7I_051 not in the Motif Atlas
- Homologous match to HL_5J7L_182
- Geometric discrepancy: 0.4217
- The information below is about HL_5J7L_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
4V7I|1|A8|G|1949
4V7I|1|A8|G|1950
4V7I|1|A8|U|1951
4V7I|1|A8|A|1952
4V7I|1|A8|A|1953
4V7I|1|A8|G|1954
4V7I|1|A8|U|1955
4V7I|1|A8|U|1956
4V7I|1|A8|C|1957
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
- Chain AK
- 50S ribosomal protein L14
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
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