HL_4V7I_052
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 4V7I|1|A8|A|2030, 4V7I|1|A8|A|2031, 4V7I|1|A8|G|2032
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7I_052 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.3034
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
4V7I|1|A8|G|2027
4V7I|1|A8|U|2028
4V7I|1|A8|G|2029
4V7I|1|A8|A|2030
4V7I|1|A8|A|2031
4V7I|1|A8|G|2032
4V7I|1|A8|A|2033
4V7I|1|A8|U|2034
4V7I|1|A8|G|2035
4V7I|1|A8|C|2036
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L3
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